Journal: bioRxiv
Article Title: IRG1/itaconate/NRF2/GSH axis in tumor-associated macrophages drives therapy resistance and immune evasion in BRCA1-deficient breast cancer
doi: 10.1101/2025.10.14.682312
Figure Lengend Snippet: a , Schematic representation of the metabolic pathway of IRG1-related metabolites. b, Heatmap indicates the relative levels of itaconate and its related metabolites in CM derived from BP-TAM and control macrophages in the untargeted metabolomic analysis. c, RT-qPCR analysis of IRG1 expression in THP-1-Mφ and 436-TAMs. Data are presented as mean ± s.d.; unpaired Student’s t-test; n = 3. d, Western blot analysis of IRG1 protein expression in THP-1-Mφ and 436-TAMs. e, RT-qPCR analysis of IRG1 expression in BMDMs and BP-TAMs. Data are presented as mean ± s.d.; unpaired Student’s t-test; n = 3. f, Western blot analysis of IRG1 protein expression in BMDMs and BP-TAMs. g, GSEA of RNA-seq data from BMDMs and BP-TAMs. h,i, Western blot analysis of STAT5 and phosphorylated STAT5 (p-STAT5) expression in THP-1-Mφ, 436-TAMs, BMDMs, and BP-TAMs. j, Western blot analysis of IRG1 protein expression in THP-1-Mφ and 436-TAMs treated with inhibitors of STAT3, STAT5, and NF-κB. The inhibitors were used at the following concentrations: STAT3-IN-1 (10 μM), STAT5-IN-1 (100 μM), and pyrrolidinedithiocarbamate ammonium (PDTC, 10 μM). k, RT-qPCR analysis of IRG1 mRNA expression in THP-1-Mφ and 436-TAMs treated with inhibitors of STAT3, STAT5, and NF-κB. Fold changes and P values in IRG1 mRNA levels in TAMs relative to THP-1-Mφ are shown. The inhibitors were used at the same concentrations as in ( j ). l, Western blot analysis of IRG1 protein expression in BMDMs and BP-TAMs treated with inhibitors of STAT3, STAT5, and NF-κB. The inhibitors were used at the same concentrations as in ( j ). m, RT-qPCR analysis of IRG1 mRNA expression in BMDMs and BP-TAMs treated with inhibitors of STAT3, STAT5, and NF-κB. Fold changes and P values in IRG1 mRNA levels in TAMs relative to BMDMs are shown. The inhibitors were used at the same concentrations as in ( j ).
Article Snippet: The following small-molecule compounds, metabolites, inhibitors, and neutralizing antibodies were used in this study: olaparib (HY-10162, MedChemExpress), L-glutathione reduced (GSH; G4251, Sigma-Aldrich, St. Louis, MO, USA), N-acetyl-L-cysteine (NAC; A7250, Sigma-Aldrich), L-(+)-lactic acid (L1750, Sigma-Aldrich), sodium L-lactate (71718, Sigma-Aldrich), itaconic acid (T4837, TargetMol, Wellesley Hills, MA, USA), citraconic acid (C82604, Sigma-Aldrich), 4-octyl itaconate (4-OI; SML2338, Sigma-Aldrich), dimethyl itaconate (DMI; T5377, TargetMol), dimethyl citraconate (DMC; C0346, TCI America, Portland, OR, USA), DL-buthionine-sulfoximine (BSO; 19176, Sigma-Aldrich), sodium oxamate (LDHi; O2751, Sigma-Aldrich), STAT5-IN-1 (S6784, Selleck Chemicals, Houston, TX, USA), STAT3-IN-1 (S0818, Selleck Chemicals), pyrrolidinedithiocarbamate ammonium (PDTC; S3633, Selleck Chemicals), RSL3 (S8155, Selleck Chemicals), Ferrostatin-1 (Fer-1; S7243, Selleck Chemicals), ML385 (T4360, TargetMol), and IRG1-IN-1 (T78525, TargetMol).
Techniques: Derivative Assay, Control, Quantitative RT-PCR, Expressing, Western Blot, RNA Sequencing